Nice video! Mine tend to look like that too so don't worry too much about your microscopy skills. I have been making more cuts in my videos lately to compensate. If you make a cut just as the camera gets a bit blurry from movement you can make it look like you quickly moved to where you meant to lol.
Though I land firmly on the arts side of things for my videos. I can really respect trying to get really good with the microscope.